ctcRbase

Entry Detail

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General Information

Database ID: PRAD06465 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: ABR Full Name: ABR, RhoGEF and GTPase activating protein Category: mRNA Synonyms: MDB Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 1003518 End Site(bp): 1229021 Gene Summary: This gene encodes a protein that is similar to the protein encoded by the breakpoint cluster region gene located on chromosome 22. The protein encoded by this gene contains a GTPase-activating protein domain, a domain found in members of the Rho family of GTP-binding proteins. Functional studies in mice determined that this protein plays a role in vestibular morphogenesis. Alternatively spliced transcript variants have been reported for this gene. [provided by RefSeq, Feb 2012] External Links: Ensembl ID: ENSG00000159842 HGNC ID: HGNC:81 Entrez Gene: 29

Expression Profile of ABR Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-107 YES YES NO hsa-miR-122-5p YES YES NO hsa-miR-124-3p YES NO YES hsa-miR-145-5p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-191-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-299-5p YES NO YES hsa-miR-302a-3p YES YES NO hsa-miR-302b-3p YES YES NO hsa-miR-302c-3p YES YES NO hsa-miR-302d-3p YES YES NO hsa-miR-302e YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-33a-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-362-5p YES NO YES hsa-miR-369-3p YES NO YES hsa-miR-372-3p YES YES NO hsa-miR-373-3p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-376c-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-499a-5p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-519d-3p YES YES NO hsa-miR-520a-3p YES YES NO hsa-miR-520b YES YES NO hsa-miR-520c-3p YES YES NO hsa-miR-520d-3p YES YES NO hsa-miR-520e YES YES NO hsa-miR-520f-3p YES NO YES hsa-miR-543 YES NO YES hsa-miR-574-5p YES NO NO hsa-miR-7-5p YES YES NO hsa-miR-93-5p YES YES NO Display: