ctcRbase

Entry Detail

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General Information

Database ID: PRAD07233 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: AFF3 Full Name: AF4/FMR2 family member 3 Category: mRNA Synonyms: LAF4|MLLT2-like Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 99545419 End Site(bp): 100142739 Gene Summary: This gene encodes a tissue-restricted nuclear transcriptional activator that is preferentially expressed in lymphoid tissue. Isolation of this protein initially defined a highly conserved LAF4/MLLT2 gene family of nuclear transcription factors that may function in lymphoid development and oncogenesis. In some ALL patients, this gene has been found fused to the gene for MLL. Multiple alternatively spliced transcript variants that encode different proteins have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000144218 HGNC ID: HGNC:6473 Entrez Gene: 3899

Expression Profile of AFF3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-130a-3p YES NO YES hsa-miR-130b-3p YES NO YES hsa-miR-134-5p YES YES YES hsa-miR-138-5p YES YES YES hsa-miR-145-5p YES NO YES hsa-miR-147a YES NO NO hsa-miR-224-5p YES YES YES hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES NO YES hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-32-5p YES YES YES hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-340-5p YES NO YES hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-454-3p YES NO YES hsa-miR-486-5p YES YES YES hsa-miR-655-3p YES NO YES hsa-miR-874-3p YES YES YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: