ctcRbase

Entry Detail

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General Information

Database ID: PRAD08590 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: AGO3 Full Name: argonaute RISC catalytic component 3 Category: mRNA Synonyms: EIF2C3 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 35930718 End Site(bp): 36072500 Gene Summary: This gene encodes a member of the Argonaute family of proteins which play a role in RNA interference. The encoded protein is highly basic, contains a PAZ domain and a PIWI domain, and may play a role in short-interfering-RNA-mediated gene silencing. This gene is located on chromosome 1 in a tandem cluster of closely related family members including argonaute 4 and eukaryotic translation initiation factor 2C, 1. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000126070 HGNC ID: HGNC:18421 Entrez Gene: 192669

Expression Profile of AGO3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-124-3p YES YES NO hsa-miR-129-5p YES YES YES hsa-miR-1-3p YES YES YES hsa-miR-151a-3p YES NO YES hsa-miR-153-3p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-206 YES YES YES hsa-miR-218-5p YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-448 YES YES YES hsa-miR-494-3p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-613 YES YES YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-98-5p YES YES YES Display: