ctcRbase

Entry Detail

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General Information

Database ID: PRAD08597 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: VIPAS39 Full Name: VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog Category: mRNA Synonyms: C14orf133|SPE-39|SPE39|VIPAR|VPS16B|hSPE-39 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 77426675 End Site(bp): 77457952 Gene Summary: This gene encodes a protein involved in the sorting of lysosomal proteins. Mutations in this gene are associated with ARCS2 (arthrogryposis, renal dysfunction, and cholestasis-2). Alternative splicing results in multiple transcript variants.[provided by RefSeq, Jul 2010] External Links: Ensembl ID: ENSG00000151445 HGNC ID: HGNC:20347 Entrez Gene: 63894

Expression Profile of VIPAS39 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-185-5p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-93-5p YES YES NO Display: