ctcRbase

Entry Detail

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General Information

Database ID: PRAD09163 Cancer Type: prostate cancer Dataset: GSE67980 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: CTDSP1 Full Name: CTD small phosphatase 1 Category: mRNA Synonyms: NIF3|NLI-IF|NLIIF|SCP1 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 218398256 End Site(bp): 218405941 Gene Summary: This gene encodes a member of the small C-terminal domain phosphatase (SCP) family of nuclear phosphatases. These proteins play a role in transcriptional regulation through specific dephosphorylation of phosphoserine 5 within tandem heptapeptide repeats of the C-terminal domain of RNA polymerase II. The encoded protein plays a role in neuronal gene silencing in non-neuronal cells, and may also inhibit osteoblast differentiation. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2011] External Links: Ensembl ID: ENSG00000144579 HGNC ID: HGNC:21614 Entrez Gene: 58190

Expression Profile of CTDSP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-183-5p YES YES YES hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-451a YES YES NO hsa-miR-494-3p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-642a-5p YES NO NO hsa-miR-96-5p YES YES YES Display: