ctcRbase

Entry Detail

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General Information

Database ID: PRAD11008 Cancer Type: prostate cancer Dataset: GSE67980 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: NFIX Full Name: nuclear factor I X Category: mRNA Synonyms: CTF|MRSHSS|NF-I/X|NF1-X|NF1A|SOTOS2 Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 12995608 End Site(bp): 13098796 Gene Summary: The protein encoded by this gene is a transcription factor that binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3 in viral and cellular promoters. The encoded protein can also stimulate adenovirus replication in vitro. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2012] External Links: Ensembl ID: ENSG00000008441 HGNC ID: HGNC:7788 Entrez Gene: 4784

Expression Profile of NFIX Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES NO YES hsa-miR-10b-5p YES NO YES hsa-miR-1197 YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-138-5p YES NO YES hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-149-5p YES YES YES hsa-miR-152-3p YES NO YES hsa-miR-155-5p YES NO YES hsa-miR-185-5p YES NO YES hsa-miR-210-3p YES NO YES hsa-miR-216b-5p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-24-3p YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-326 YES NO YES hsa-miR-330-5p YES NO YES hsa-miR-33a-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-409-3p YES NO YES hsa-miR-423-5p YES NO YES hsa-miR-491-5p YES NO NO hsa-miR-506-3p YES NO YES hsa-miR-541-3p YES NO NO hsa-miR-625-5p YES NO NO hsa-miR-654-5p YES NO NO hsa-miR-663a YES NO NO hsa-miR-744-5p YES NO YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: