ctcRbase

Entry Detail

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General Information

Database ID: PRAD11438 Cancer Type: prostate cancer Dataset: GSE67980 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SCD Full Name: stearoyl-CoA desaturase Category: mRNA Synonyms: FADS5|MSTP008|SCD1|SCDOS|hSCD1 Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 100347124 End Site(bp): 100364834 Gene Summary: This gene encodes an enzyme involved in fatty acid biosynthesis, primarily the synthesis of oleic acid. The protein belongs to the fatty acid desaturase family and is an integral membrane protein located in the endoplasmic reticulum. Transcripts of approximately 3.9 and 5.2 kb, differing only by alternative polyadenlyation signals, have been detected. A gene encoding a similar enzyme is located on chromosome 4 and a pseudogene of this gene is located on chromosome 17. [provided by RefSeq, Sep 2015] External Links: Ensembl ID: ENSG00000099194 HGNC ID: HGNC:10571 Entrez Gene: 6319

Expression Profile of SCD Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-128-3p YES NO YES hsa-miR-1321 YES NO NO hsa-miR-1-3p YES NO YES hsa-miR-141-3p YES YES NO hsa-miR-142-3p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-185-5p YES NO NO hsa-miR-186-5p YES NO NO hsa-miR-192-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-200a-3p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-204-5p YES YES NO hsa-miR-206 YES NO YES hsa-miR-211-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-324-5p YES YES NO hsa-miR-346 YES YES NO hsa-miR-382-5p YES NO YES hsa-miR-383-5p YES YES NO hsa-miR-429 YES YES YES hsa-miR-433-3p YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-499a-5p YES YES NO hsa-miR-506-3p YES YES YES hsa-miR-599 YES YES NO hsa-miR-613 YES NO YES hsa-miR-98-5p YES YES YES Display: