ctcRbase

Entry Detail

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General Information

Database ID: PRAD11681 Cancer Type: prostate cancer Dataset: GSE67980 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: TOM1L2 Full Name: target of myb1 like 2 membrane trafficking protein Category: mRNA Synonyms: - Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 17843511 End Site(bp): 17972422 Gene Summary: This gene belongs to a small gene family whose members have an N-terminal VHS domain followed by a GAT domain; domains which typically participate in vesicular trafficking. The canonical protein encoded by this gene also has a C-terminal clathrin binding motif. This protein has been shown to interact with Tollip, clathrin and ubiquitin and is thought to play a role in endosomal sorting. This gene resides in the 3.7 Mb deletion of chromosome region 17p11.2 that is associated with Smith-Magenis syndrome. Alternative splicing results in multiple transcript variants encoding distinct proteins. [provided by RefSeq, Apr 2017] External Links: Ensembl ID: ENSG00000175662 HGNC ID: HGNC:11984 Entrez Gene: 146691

Expression Profile of TOM1L2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-141-3p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES NO YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-454-3p YES YES YES hsa-miR-485-5p YES NO YES hsa-miR-496 YES YES YES hsa-miR-520f-3p YES NO YES Display: