Entry Detail



General Information

Database ID:SKCM00032
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:LDHB
Full Name:lactate dehydrogenase B
Category:mRNA
Synonyms:HEL-S-281|LDH-B|LDH-H|LDHBD|TRG-5
Chromosome:chr12
Strand:-
Coordinate:
Start Site(bp):21635342End Site(bp):21757857
Gene Summary:This gene encodes the B subunit of lactate dehydrogenase enzyme, which catalyzes the interconversion of pyruvate and lactate with concomitant interconversion of NADH and NAD+ in a post-glycolysis process. Alternatively spliced transcript variants have been found for this gene. Recent studies have shown that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is localized in the peroxisomes. Mutations in this gene are associated with lactate dehydrogenase B deficiency. Pseudogenes have been identified on chromosomes X, 5 and 13. [provided by RefSeq, Feb 2016]
External Links:
Ensembl ID:ENSG00000111716
HGNC ID:HGNC:6541
Entrez Gene:3945



Expression Profile of LDHB Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-23a-3p
YES
YES
NO
hsa-miR-23b-3p
YES
YES
NO
hsa-miR-335-5p
YES
YES
NO
hsa-miR-375
YES
YES
NO
Display: