Entry Detail



General Information

Database ID:SKCM00912
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:LSM6
Full Name:LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
Category:mRNA
Synonyms:YDR378C
Chromosome:chr4
Strand:+
Coordinate:
Start Site(bp):146175685End Site(bp):146200000
Gene Summary:Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004]
External Links:
Ensembl ID:ENSG00000164167
HGNC ID:HGNC:17017
Entrez Gene:11157



Expression Profile of LSM6 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-340-5p
YES
YES
NO
hsa-miR-410-3p
YES
YES
NO
hsa-miR-425-5p
YES
YES
NO
hsa-miR-543
YES
YES
NO
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