ctcRbase

Entry Detail

---



General Information

Database ID: SKCM00979 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PRPF40A Full Name: pre-mRNA processing factor 40 homolog A Category: mRNA Synonyms: FBP-11|FBP11|FLAF1|FNBP3|HIP-10|HIP10|HYPA|NY-REN-6|Prp40 Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 152651593 End Site(bp): 152717997 Gene Summary: NA External Links: Ensembl ID: ENSG00000196504 HGNC ID: HGNC:16463 Entrez Gene: 55660

Expression Profile of PRPF40A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-129-5p YES NO YES hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-138-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-186-5p YES NO YES hsa-miR-199a-5p YES YES YES hsa-miR-199b-5p YES YES YES hsa-miR-216a-5p YES YES YES hsa-miR-216b-5p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-24-3p YES YES NO hsa-miR-25-3p YES NO YES hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-31-5p YES YES NO hsa-miR-32-5p YES NO YES hsa-miR-340-5p YES YES YES hsa-miR-363-3p YES NO YES hsa-miR-365a-3p YES YES YES hsa-miR-367-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-487a-3p YES NO YES hsa-miR-488-3p YES NO YES hsa-miR-92a-3p YES NO YES hsa-miR-92b-3p YES NO YES Display: