Entry Detail



General Information

Database ID:SKCM01225
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:TBPL1
Full Name:TATA-box binding protein like 1
Category:mRNA
Synonyms:MGC:8389|MGC:9620|STUD|TLF|TLP|TRF2
Chromosome:chr6
Strand:+
Coordinate:
Start Site(bp):133952170End Site(bp):133990432
Gene Summary:This gene encodes a member of the TATA box-binding protein family. TATA box-binding proteins play a critical role in transcription by RNA polymerase II as components of the transcription factor IID (TFIID) complex. The encoded protein does not bind to the TATA box and initiates transcription from TATA-less promoters. This gene plays a critical role in spermatogenesis, and single nucleotide polymorphisms in this gene may be associated with male infertility. Alternatively spliced transcript variants have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 3. [provided by RefSeq, Nov 2011]
External Links:
Ensembl ID:ENSG00000028839
HGNC ID:HGNC:11589
Entrez Gene:9519



Expression Profile of TBPL1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-103a-3p
YES
YES
NO
hsa-miR-107
YES
YES
NO
hsa-miR-130a-3p
YES
NO
YES
hsa-miR-130b-3p
YES
YES
YES
hsa-miR-133a-3p
YES
YES
YES
hsa-miR-133b
YES
YES
YES
hsa-miR-142-3p
YES
YES
NO
hsa-miR-145-5p
YES
YES
YES
hsa-miR-15a-5p
YES
YES
YES
hsa-miR-15b-5p
YES
YES
YES
hsa-miR-16-5p
YES
YES
YES
hsa-miR-181a-5p
YES
YES
YES
hsa-miR-181b-5p
YES
YES
YES
hsa-miR-181c-5p
YES
YES
YES
hsa-miR-181d-5p
YES
YES
YES
hsa-miR-18a-5p
YES
YES
YES
hsa-miR-18b-5p
YES
YES
YES
hsa-miR-195-5p
YES
YES
YES
hsa-miR-196a-5p
YES
YES
YES
hsa-miR-196b-5p
YES
YES
YES
hsa-miR-214-3p
YES
YES
NO
hsa-miR-300
YES
YES
NO
hsa-miR-301a-3p
YES
YES
YES
hsa-miR-301b-3p
YES
YES
YES
hsa-miR-30a-5p
YES
YES
YES
hsa-miR-30b-5p
YES
YES
YES
hsa-miR-30c-5p
YES
YES
YES
hsa-miR-30d-5p
YES
YES
YES
hsa-miR-30e-5p
YES
YES
YES
hsa-miR-371a-5p
YES
YES
NO
hsa-miR-381-3p
YES
YES
NO
hsa-miR-424-5p
YES
YES
YES
hsa-miR-431-5p
YES
YES
YES
hsa-miR-454-3p
YES
NO
YES
hsa-miR-497-5p
YES
YES
YES
hsa-miR-503-5p
YES
YES
NO
hsa-miR-542-3p
YES
YES
YES
hsa-miR-9-5p
YES
YES
YES
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