ctcRbase

Entry Detail

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General Information

Database ID: SKCM01416 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GGPS1 Full Name: geranylgeranyl diphosphate synthase 1 Category: mRNA Synonyms: GGPPS|GGPPS1 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 235327350 End Site(bp): 235344532 Gene Summary: This gene is a member of the prenyltransferase family and encodes a protein with geranylgeranyl diphosphate (GGPP) synthase activity. The enzyme catalyzes the synthesis of GGPP from farnesyl diphosphate and isopentenyl diphosphate. GGPP is an important molecule responsible for the C20-prenylation of proteins and for the regulation of a nuclear hormone receptor. Alternate transcriptional splice variants, both protein-coding and non-protein-coding, have been found for this gene. [provided by RefSeq, Sep 2010] External Links: Ensembl ID: ENSG00000152904 HGNC ID: HGNC:4249 Entrez Gene: 9453

Expression Profile of GGPS1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-379-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-9-5p YES YES NO Display: