Entry Detail



General Information

Database ID:SKCM02321
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:TRAF3IP2
Full Name:TRAF3 interacting protein 2
Category:mRNA
Synonyms:ACT1|C6orf2|C6orf4|C6orf5|C6orf6|CANDF8|CIKS|PSORS13
Chromosome:chr6
Strand:-
Coordinate:
Start Site(bp):111556454End Site(bp):111606278
Gene Summary:This gene encodes a protein involved in regulating responses to cytokines by members of the Rel/NF-kappaB transcription factor family. These factors play a central role in innate immunity in response to pathogens, inflammatory signals and stress. This gene product interacts with TRAF proteins (tumor necrosis factor receptor-associated factors) and either I-kappaB kinase or MAP kinase to activate either NF-kappaB or Jun kinase. Several alternative transcripts encoding different isoforms have been identified. Another transcript, which does not encode a protein and is transcribed in the opposite orientation, has been identified. Overexpression of this transcript has been shown to reduce expression of at least one of the protein encoding transcripts, suggesting it has a regulatory role in the expression of this gene. [provided by RefSeq, Aug 2009]
External Links:
Ensembl ID:ENSG00000056972
HGNC ID:HGNC:1343
Entrez Gene:10758



Expression Profile of TRAF3IP2 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-133a-3p
YES
NO
YES
hsa-miR-133b
YES
NO
YES
hsa-miR-149-5p
YES
NO
YES
hsa-miR-193b-3p
YES
YES
NO
hsa-miR-30a-5p
YES
YES
YES
hsa-miR-30b-5p
YES
YES
YES
hsa-miR-30c-5p
YES
YES
YES
hsa-miR-30d-5p
YES
YES
YES
hsa-miR-30e-5p
YES
YES
YES
hsa-miR-543
YES
YES
NO
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