ctcRbase

Entry Detail

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General Information

Database ID: SKCM02664 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: LSM14A Full Name: LSM14A, mRNA processing body assembly factor Category: mRNA Synonyms: C19orf13|FAM61A|RAP55|RAP55A Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 34172504 End Site(bp): 34229515 Gene Summary: Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000257103 HGNC ID: HGNC:24489 Entrez Gene: 26065

Expression Profile of LSM14A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-1271-5p YES YES YES hsa-miR-132-3p YES YES NO hsa-miR-137 YES YES NO hsa-miR-138-5p YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-155-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-338-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES YES YES Display: