ctcRbase

Entry Detail

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General Information

Database ID: SKCM02676 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: UBR4 Full Name: ubiquitin protein ligase E3 component n-recognin 4 Category: mRNA Synonyms: RBAF600|ZUBR1|p600 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 19074506 End Site(bp): 19210276 Gene Summary: The protein encoded by this gene is an E3 ubiquitin-protein ligase that interacts with the retinoblastoma-associated protein in the nucleus and with calcium-bound calmodulin in the cytoplasm. The encoded protein appears to be a cytoskeletal component in the cytoplasm and part of the chromatin scaffold in the nucleus. In addition, this protein is a target of the human papillomavirus type 16 E7 oncoprotein. [provided by RefSeq, Aug 2010] External Links: Ensembl ID: ENSG00000127481 HGNC ID: HGNC:30313 Entrez Gene: 23352

Expression Profile of UBR4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-1297 YES YES YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-324-5p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-34a-5p NO YES YES hsa-miR-34c-5p NO YES YES hsa-miR-362-3p YES YES NO hsa-miR-449a NO YES YES hsa-miR-449b-5p NO YES YES hsa-miR-455-5p NO YES YES hsa-miR-542-3p NO YES YES hsa-miR-873-5p YES YES NO Display: