ctcRbase

Entry Detail

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General Information

Database ID: SKCM02729 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: XRN2 Full Name: 5'-3' exoribonuclease 2 Category: mRNA Synonyms: - Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 21303304 End Site(bp): 21389827 Gene Summary: This gene encodes a 5'-3' exonuclease that promotes transcription termination at cotranscriptional cleavage sites. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000088930 HGNC ID: HGNC:12836 Entrez Gene: 22803

Expression Profile of XRN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-208a-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-9-5p YES YES NO Display: