ctcRbase

Entry Detail

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General Information

Database ID: SKCM02934 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: WBP11 Full Name: WW domain binding protein 11 Category: mRNA Synonyms: NPWBP|PPP1R165|SIPP1|WBP-11 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 14784579 End Site(bp): 14803540 Gene Summary: This gene encodes a nuclear protein, which colocalizes with mRNA splicing factors and intermediate filament-containing perinuclear networks. This protein has 95% amino acid sequence identity to the mouse Wbp11 protein. It contains two proline-rich regions that bind to the WW domain of Npw38, a nuclear protein, and thus this protein is also called Npw38-binding protein NpwBP. The Npw38-NpwBP complex may function as a component of an mRNA factory in the nucleus. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000084463 HGNC ID: HGNC:16461 Entrez Gene: 51729

Expression Profile of WBP11 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-10a-5p YES YES YES hsa-miR-10b-5p YES YES YES hsa-miR-124-3p YES YES NO hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-1-3p YES YES NO hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-206 YES YES NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-223-3p YES YES NO hsa-miR-31-5p YES YES YES hsa-miR-371a-5p YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-455-5p YES YES NO hsa-miR-488-3p YES YES YES hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-613 YES YES NO hsa-miR-873-5p YES YES NO Display: