ctcRbase

Entry Detail

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General Information

Database ID: SKCM02939 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SH3BP5 Full Name: SH3 domain binding protein 5 Category: mRNA Synonyms: SAB|SH3BP-5 Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 15254853 End Site(bp): 15341368 Gene Summary: NA External Links: Ensembl ID: ENSG00000131370 HGNC ID: HGNC:10827 Entrez Gene: 9467

Expression Profile of SH3BP5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-147a YES NO NO hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-17-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-204-5p YES YES YES hsa-miR-206 YES YES NO hsa-miR-208a-3p YES YES YES hsa-miR-208b-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-219a-2-3p YES NO YES hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-335-5p YES YES YES hsa-miR-338-3p YES YES NO hsa-miR-384 YES NO YES hsa-miR-411-5p YES YES NO hsa-miR-499a-5p YES YES YES hsa-miR-519d-3p YES YES YES hsa-miR-542-3p YES YES YES hsa-miR-613 YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-96-5p YES YES YES Display: