ctcRbase

Entry Detail

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General Information

Database ID: SKCM03083 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: EIF3J Full Name: eukaryotic translation initiation factor 3 subunit J Category: mRNA Synonyms: EIF3S1|eIF3-alpha|eIF3-p35 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 44537057 End Site(bp): 44563029 Gene Summary: This gene encodes a core subunit of the eukaryotic initiation factor 3 complex, which participates in the initiation of translation by aiding in the recruitment of protein and mRNA components to the 40S ribosome. There are pseudogenes for this gene on chromosomes 1, 3, and 9. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2013] External Links: Ensembl ID: ENSG00000104131 HGNC ID: HGNC:3270 Entrez Gene: 8669

Expression Profile of EIF3J Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-129-2-3p YES NO YES hsa-miR-132-3p YES YES NO hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-134-5p YES YES YES hsa-miR-137 YES YES YES hsa-miR-138-5p YES NO YES hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-208a-3p YES YES YES hsa-miR-208b-3p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-217 YES YES YES hsa-miR-218-5p YES NO YES hsa-miR-219a-5p YES NO YES hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-25-3p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-32-5p YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-335-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-346 YES YES NO hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-429 YES NO YES hsa-miR-488-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-499a-5p YES YES YES hsa-miR-543 YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO hsa-miR-96-5p YES YES YES Display: