ctcRbase

Entry Detail

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General Information

Database ID: SKCM04412 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PRPF38B Full Name: pre-mRNA processing factor 38B Category: mRNA Synonyms: NET1 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 108692323 End Site(bp): 108701803 Gene Summary: NA External Links: Ensembl ID: ENSG00000134186 HGNC ID: HGNC:25512 Entrez Gene: 55119

Expression Profile of PRPF38B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-101-3p YES YES NO hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-1197 YES NO YES hsa-miR-124-3p YES YES YES hsa-miR-136-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-217 YES NO YES hsa-miR-300 YES YES YES hsa-miR-335-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-369-3p YES NO YES hsa-miR-371a-5p YES YES YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-381-3p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-429 YES YES YES hsa-miR-433-3p YES YES YES hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-485-5p YES YES YES hsa-miR-491-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-655-3p YES NO YES hsa-miR-876-5p YES YES NO hsa-miR-98-5p YES YES YES Display: