ctcRbase

Entry Detail

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General Information

Database ID: SKCM04449 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: LARP4B Full Name: La ribonucleoprotein domain family member 4B Category: mRNA Synonyms: KIAA0217|LARP5 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 806914 End Site(bp): 931705 Gene Summary: This gene encodes a member of an evolutionarily conserved protein family implicated in RNA metabolism and translation. Members of this family are characterized by the presence of an La motif, which is often located adjacent to one or more RNA recognition motifs (RRM). Together, the two motifs constitute the functional region of the protein and enable its interaction with the RNA substrate. This protein family is divided into five sub-families: the genuine La proteins and four La-related protein (LARP) sub-families. The protein encoded by this gene belongs to LARP sub-family 4. It is a cytoplasmic protein that may play a stimulatory role in translation. [provided by RefSeq, Oct 2012] External Links: Ensembl ID: ENSG00000107929 HGNC ID: HGNC:28987 Entrez Gene: 23185

Expression Profile of LARP4B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-122-5p YES NO YES hsa-miR-124-3p YES YES YES hsa-miR-1297 YES YES YES hsa-miR-139-5p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-186-5p YES YES YES hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-216a-5p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-219a-5p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES NO YES hsa-miR-329-3p YES YES YES hsa-miR-335-5p YES NO YES hsa-miR-33a-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-346 YES NO YES hsa-miR-361-5p YES YES YES hsa-miR-362-3p YES YES YES hsa-miR-362-5p YES NO YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-381-3p YES NO YES hsa-miR-409-5p YES NO YES hsa-miR-421 YES YES YES hsa-miR-425-5p YES YES YES hsa-miR-454-3p YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-499a-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-543 YES NO YES hsa-miR-625-5p YES NO NO hsa-miR-653-5p YES YES NO hsa-miR-655-3p YES NO YES Display: