ctcRbase

Entry Detail

---



General Information

Database ID: SKCM05330 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: DNAJC21 Full Name: DnaJ heat shock protein family (Hsp40) member C21 Category: mRNA Synonyms: BMFS3|DNAJA5|GS3|JJJ1 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 34929593 End Site(bp): 34958964 Gene Summary: This gene encodes a member of the DNAJ heat shock protein 40 family of proteins that is characterized by two N-terminal tetratricopeptide repeat domains and a C-terminal DNAJ domain. This protein binds the precursor 45S ribosomal RNA and may be involved in early nuclear ribosomal RNA biogenesis and maturation of the 60S ribosomal subunit. Mutations in this gene result in Bone marrow failure syndrome 3. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Feb 2017] External Links: Ensembl ID: ENSG00000168724 HGNC ID: HGNC:27030 Entrez Gene: 134218

Expression Profile of DNAJC21 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-194-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-486-5p YES YES YES Display: