ctcRbase

Entry Detail

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General Information

Database ID: SKCM05347 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: POM121 Full Name: POM121 transmembrane nucleoporin Category: mRNA Synonyms: P145|POM121A Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 72879365 End Site(bp): 72951440 Gene Summary: This gene encodes a transmembrane protein that localizes to the inner nuclear membrane and forms a core component of the nuclear pore complex, which mediates transport to and from the nucleus. The encoded protein may anchor this complex to the nuclear envelope. There are multiple related genes and pseudogenes for this gene on chromosomes 5, 7, 15, and 22. Alternatively spliced transcript variants encoding different isoforms have been observed. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000196313 HGNC ID: HGNC:19702 Entrez Gene: 9883

Expression Profile of POM121 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES NO hsa-miR-128-3p YES NO YES hsa-miR-129-2-3p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-143-3p YES YES NO hsa-miR-150-5p YES YES YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-184 YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES YES hsa-miR-216a-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-22-3p YES NO YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-532-3p YES NO YES hsa-miR-590-5p YES YES YES Display: