ctcRbase

Entry Detail

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General Information

Database ID: SKCM05360 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CCDC174 Full Name: coiled-coil domain containing 174 Category: mRNA Synonyms: C3orf19|HSPC212|IHPM|IHPMR Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 14651746 End Site(bp): 14672659 Gene Summary: The protein encoded by this gene is found in the nucleus, where it interacts with eukaryotic translation initiation factor 4A, isoform 3. The encoded protein appears to be a part of the exon junction complex, which is involved in RNA processing, translation, and nonsense-mediated mRNA decay. A mutation in this gene has been associated with infantile hypotonia with psychomotor retardation. [provided by RefSeq, Mar 2016] External Links: Ensembl ID: ENSG00000154781 HGNC ID: HGNC:28033 Entrez Gene: 51244

Expression Profile of CCDC174 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-506-3p YES YES NO Display: