ctcRbase

Entry Detail

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General Information

Database ID: SKCM05727 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ERC1 Full Name: ELKS/RAB6-interacting/CAST family member 1 Category: mRNA Synonyms: Cast2|ELKS|ERC-1|RAB6IP2 Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 990509 End Site(bp): 1495933 Gene Summary: The protein encoded by this gene is a member of a family of RIM-binding proteins. RIMs are active zone proteins that regulate neurotransmitter release. This gene has been found fused to the receptor-type tyrosine kinase gene RET by gene rearrangement due to the translocation t(10;12)(q11;p13) in thyroid papillary carcinoma. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014] External Links: Ensembl ID: ENSG00000082805 HGNC ID: HGNC:17072 Entrez Gene: 23085

Expression Profile of ERC1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-142-3p YES YES YES hsa-miR-216a-5p NO YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-296-3p YES YES NO Display: