ctcRbase

Entry Detail

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General Information

Database ID: SKCM06044 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ST6GAL1 Full Name: ST6 beta-galactoside alpha-2,6-sialyltransferase 1 Category: mRNA Synonyms: SIAT1|ST6GalI|ST6N Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 186930485 End Site(bp): 187078553 Gene Summary: This gene encodes a member of glycosyltransferase family 29. The encoded protein is a type II membrane protein that catalyzes the transfer of sialic acid from CMP-sialic acid to galactose-containing substrates. The protein, which is normally found in the Golgi but can be proteolytically processed to a soluble form, is involved in the generation of the cell-surface carbohydrate determinants and differentiation antigens HB-6, CD75, and CD76. This gene has been incorrectly referred to as CD75. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2017] External Links: Ensembl ID: ENSG00000073849 HGNC ID: HGNC:10860 Entrez Gene: 6480

Expression Profile of ST6GAL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES YES YES hsa-miR-147a YES NO NO hsa-miR-150-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-21-5p YES YES YES hsa-miR-29b-3p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-590-5p YES YES YES Display: