ctcRbase

Entry Detail

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General Information

Database ID: SKCM06069 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: KLF13 Full Name: Kruppel like factor 13 Category: mRNA Synonyms: BTEB3|FKLF2|NSLP1|RFLAT-1|RFLAT1 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 31326855 End Site(bp): 31435665 Gene Summary: KLF13 belongs to a family of transcription factors that contain 3 classical zinc finger DNA-binding domains consisting of a zinc atom tetrahedrally coordinated by 2 cysteines and 2 histidines (C2H2 motif). These transcription factors bind to GC-rich sequences and related GT and CACCC boxes (Scohy et al., 2000 [PubMed 11087666]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000169926 HGNC ID: HGNC:13672 Entrez Gene: 51621

Expression Profile of KLF13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1197 YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-130a-3p YES NO YES hsa-miR-130b-3p YES NO YES hsa-miR-1-3p YES NO YES hsa-miR-142-3p YES NO YES hsa-miR-143-3p YES NO YES hsa-miR-153-3p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-19a-3p YES NO YES hsa-miR-19b-3p YES NO YES hsa-miR-200b-3p YES NO YES hsa-miR-200c-3p YES NO YES hsa-miR-206 YES NO YES hsa-miR-301a-3p YES NO YES hsa-miR-301b-3p YES NO YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-30a-5p YES NO YES hsa-miR-31-5p YES NO YES hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-324-5p YES NO YES hsa-miR-342-3p YES NO YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-429 YES NO YES hsa-miR-448 YES NO YES hsa-miR-454-3p YES NO YES hsa-miR-490-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-613 YES NO YES hsa-miR-625-5p YES NO NO hsa-miR-96-5p YES NO YES Display: