ctcRbase

Entry Detail

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General Information

Database ID: SKCM06158 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RAB22A Full Name: RAB22A, member RAS oncogene family Category: mRNA Synonyms: - Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 58309696 End Site(bp): 58367507 Gene Summary: The protein encoded by this gene is a member of the RAB family of small GTPases. The GTP-bound form of the encoded protein has been shown to interact with early-endosomal antigen 1, and may be involved in the trafficking of and interaction between endosomal compartments. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000124209 HGNC ID: HGNC:9764 Entrez Gene: 57403

Expression Profile of RAB22A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-106a-5p YES NO YES hsa-miR-106b-5p YES NO YES hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-1297 YES YES NO hsa-miR-138-5p YES NO YES hsa-miR-142-5p YES NO YES hsa-miR-17-5p YES NO YES hsa-miR-182-5p YES NO YES hsa-miR-18a-5p YES NO YES hsa-miR-18b-5p YES NO YES hsa-miR-204-5p YES YES YES hsa-miR-20a-5p YES NO YES hsa-miR-20b-5p YES NO YES hsa-miR-211-5p YES YES YES hsa-miR-21-5p YES NO YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-302a-3p YES NO YES hsa-miR-302b-3p YES NO YES hsa-miR-302c-3p YES NO YES hsa-miR-302d-3p YES NO YES hsa-miR-302e YES NO YES hsa-miR-328-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-365a-3p YES NO YES hsa-miR-372-3p YES NO YES hsa-miR-373-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-384 YES NO YES hsa-miR-424-5p YES YES NO hsa-miR-493-3p YES NO YES hsa-miR-495-3p YES NO NO hsa-miR-499a-5p YES NO YES hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES NO YES hsa-miR-520a-3p YES NO YES hsa-miR-520b YES NO YES hsa-miR-520c-3p YES NO YES hsa-miR-520d-3p YES NO YES hsa-miR-520e YES NO YES hsa-miR-520f-3p YES NO YES hsa-miR-548o-3p YES NO NO hsa-miR-590-5p YES NO YES hsa-miR-873-5p YES NO YES hsa-miR-93-5p YES NO YES hsa-miR-98-5p YES NO YES Display: