Entry Detail



General Information

Database ID:SKCM06312
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:FBXW4
Full Name:F-box and WD repeat domain containing 4
Category:mRNA
Synonyms:DAC|FBW4|FBWD4|SHFM3|SHSF3
Chromosome:chr10
Strand:-
Coordinate:
Start Site(bp):101610664End Site(bp):101695295
Gene Summary:This gene is a member of the F-box/WD-40 gene family, which recruit specific target proteins through their WD-40 protein-protein binding domains for ubiquitin mediated degradation. In mouse, a highly similar protein is thought to be responsible for maintaining the apical ectodermal ridge of developing limb buds; disruption of the mouse gene results in the absence of central digits, underdeveloped or absent metacarpal/metatarsal bones and syndactyly. This phenotype is remarkably similar to split hand-split foot malformation in humans, a clinically heterogeneous condition with a variety of modes of transmission. An autosomal recessive form has been mapped to the chromosomal region where this gene is located, and complex rearrangements involving duplications of this gene and others have been associated with the condition. A pseudogene of this locus has been mapped to one of the introns of the BCR gene on chromosome 22. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000107829
HGNC ID:HGNC:10847
Entrez Gene:6468



Expression Profile of FBXW4 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-let-7a-5p
YES
YES
NO
hsa-let-7b-5p
YES
YES
NO
hsa-let-7c-5p
YES
YES
NO
hsa-let-7d-5p
YES
YES
NO
hsa-let-7e-5p
YES
YES
NO
hsa-let-7f-5p
YES
YES
NO
hsa-let-7g-5p
YES
YES
NO
hsa-let-7i-5p
YES
YES
NO
hsa-miR-125a-5p
YES
YES
YES
hsa-miR-125b-5p
YES
YES
YES
hsa-miR-28-5p
YES
YES
NO
hsa-miR-31-5p
YES
YES
NO
hsa-miR-330-3p
YES
NO
YES
hsa-miR-34a-5p
YES
YES
NO
hsa-miR-34c-5p
YES
YES
NO
hsa-miR-421
YES
YES
NO
hsa-miR-449a
YES
YES
NO
hsa-miR-449b-5p
YES
YES
NO
hsa-miR-708-5p
YES
YES
NO
hsa-miR-98-5p
YES
YES
NO
Display: