ctcRbase

Entry Detail

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General Information

Database ID: SKCM06417 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SIKE1 Full Name: suppressor of IKBKE 1 Category: mRNA Synonyms: SIKE Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 114769479 End Site(bp): 114780685 Gene Summary: SIKE interacts with IKK-epsilon (IKBKE; MIM 605048) and TBK1 (MIM 604834) and acts as a suppressor of TLR3 (MIM 603029) and virus-triggered interferon activation pathways (Huang et al., 2005 [PubMed 16281057]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000052723 HGNC ID: HGNC:26119 Entrez Gene: 80143

Expression Profile of SIKE1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-1271-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-142-3p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-145-5p YES YES YES hsa-miR-147a YES NO NO hsa-miR-17-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-186-5p YES NO NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES NO YES hsa-miR-217 YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p YES NO NO hsa-miR-27b-3p YES NO NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-31-5p YES NO YES hsa-miR-323a-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-371a-5p YES NO YES hsa-miR-376c-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-383-5p YES NO YES hsa-miR-384 YES YES NO hsa-miR-429 YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-7-5p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-96-5p YES YES NO Display: