ctcRbase

Entry Detail

---



General Information

Database ID: SKCM06478 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: FBXO16 Full Name: F-box protein 16 Category: mRNA Synonyms: FBX16 Chromosome: chr8 Strand: - Coordinate: Start Site(bp): 28348287 End Site(bp): 28490318 Gene Summary: This gene encodes a member of the F-box protein family, members of which are characterized by an approximately 40 amino acid motif, the F-box. The F-box proteins constitute one of the four subunits of ubiquitin protein ligase complex called SCFs (SKP1-cullin-F-box), which function in phosphorylation-dependent ubiquitination. The F-box proteins are divided into three classes: Fbws containing WD-40 domains, Fbls containing leucine-rich repeats, and Fbxs containing either different protein-protein interaction modules or no recognizable motifs. The protein encoded by this gene belongs to the Fbx class. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2012] External Links: Ensembl ID: ENSG00000214050 HGNC ID: HGNC:13618 Entrez Gene: 157574

Expression Profile of FBXO16 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-133a-3p YES NO YES hsa-miR-133b YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-223-3p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-299-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-760 YES NO YES hsa-miR-9-5p YES YES YES Display: