ctcRbase

Entry Detail

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General Information

Database ID: SKCM06591 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: S100PBP Full Name: S100P binding protein Category: mRNA Synonyms: S100PBPR Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 32816767 End Site(bp): 32858879 Gene Summary: This gene encodes a protein that was originally identified by its interaction with S100 calcium-binding protein P. Expression of this protein has been reported to be associated with pancreatic ductal adenocarcinoma. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jan 2012] External Links: Ensembl ID: ENSG00000116497 HGNC ID: HGNC:25768 Entrez Gene: 64766

Expression Profile of S100PBP Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES NO hsa-miR-141-3p YES NO YES hsa-miR-143-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-153-3p YES YES NO hsa-miR-154-5p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-186-5p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-206 YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-221-3p YES NO YES hsa-miR-222-3p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-330-3p YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-411-5p YES YES NO hsa-miR-429 YES YES YES hsa-miR-455-3p YES NO YES hsa-miR-758-3p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-9-5p YES YES YES Display: