ctcRbase

Entry Detail

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General Information

Database ID: SKCM06683 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SLAIN1 Full Name: SLAIN motif family member 1 Category: mRNA Synonyms: C13orf32 Chromosome: chr13 Strand: + Coordinate: Start Site(bp): 77697854 End Site(bp): 77764242 Gene Summary: NA External Links: Ensembl ID: ENSG00000139737 HGNC ID: HGNC:26387 Entrez Gene: 122060

Expression Profile of SLAIN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-128-3p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-134-5p YES YES NO hsa-miR-137 YES YES YES hsa-miR-140-5p YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-375 YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-382-5p YES YES YES hsa-miR-384 YES YES NO hsa-miR-421 YES YES NO hsa-miR-429 YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-486-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-543 YES YES YES hsa-miR-876-5p YES YES NO Display: