ctcRbase

Entry Detail

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General Information

Database ID: SKCM06737 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ZMYM2 Full Name: zinc finger MYM-type containing 2 Category: mRNA Synonyms: FIM|MYM|RAMP|SCLL|ZNF198 Chromosome: chr13 Strand: + Coordinate: Start Site(bp): 19958670 End Site(bp): 20091829 Gene Summary: The protein encoded by this gene is a zinc finger protein that may act as a transcription factor. The encoded protein may be part of a BHC histone deacetylase complex. Translocation of this gene with the fibroblast growth factor receptor-1 gene (FGFR1) results in a fusion gene, which may be a cause of stem cell leukemia lymphoma syndrome (SCLL). Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2010] External Links: Ensembl ID: ENSG00000121741 HGNC ID: HGNC:12989 Entrez Gene: 7750

Expression Profile of ZMYM2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-1323 YES NO NO hsa-miR-142-3p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-155-5p YES YES YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-197-3p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-323a-3p YES NO YES hsa-miR-338-3p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-369-3p YES NO NO hsa-miR-371a-5p YES YES NO hsa-miR-376c-3p YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES YES NO hsa-miR-520f-3p YES NO YES hsa-miR-548o-3p YES NO NO hsa-miR-582-5p YES NO YES hsa-miR-875-5p YES YES NO Display: