ctcRbase

Entry Detail

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General Information

Database ID: SKCM06823 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TTC21B Full Name: tetratricopeptide repeat domain 21B Category: mRNA Synonyms: ATD4|IFT139|IFT139B|JBTS11|NPHP12|Nbla10696|SRTD4|THM1 Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 165857475 End Site(bp): 165953843 Gene Summary: This gene encodes a member of TTC21 family, containing several tetratricopeptide repeat (TPR) domains. This protein is localized to the cilium axoneme, and may play a role in retrograde intraflagellar transport in cilia. Mutations in this gene are associated with various ciliopathies, nephronophthisis 12, and asphyxiating thoracic dystrophy 4. [provided by RefSeq, Oct 2011] External Links: Ensembl ID: ENSG00000123607 HGNC ID: HGNC:25660 Entrez Gene: 79809

Expression Profile of TTC21B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-497-5p YES YES NO Display: