ctcRbase

Entry Detail

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General Information

Database ID: SKCM06944 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GTPBP1 Full Name: GTP binding protein 1 Category: mRNA Synonyms: GP-1|GP1|HSPC018 Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 38705723 End Site(bp): 38738299 Gene Summary: This gene is upregulated by interferon-gamma and encodes a protein that is a member of the AGP11/GTPBP1 family of GTP-binding proteins. A structurally similar protein has been found in mouse, where disruption of the gene for that protein had no observable phenotype. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000100226 HGNC ID: HGNC:4669 Entrez Gene: 9567

Expression Profile of GTPBP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-138-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-185-5p YES YES YES hsa-miR-21-5p YES YES YES hsa-miR-219a-5p YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-331-3p YES NO YES hsa-miR-340-5p YES NO YES hsa-miR-346 YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-455-3p YES NO YES hsa-miR-491-5p YES YES NO hsa-miR-590-5p YES YES YES hsa-miR-9-5p YES NO YES hsa-miR-96-5p YES NO YES Display: