ctcRbase

Entry Detail

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General Information

Database ID: SKCM06968 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TSKU Full Name: tsukushi, small leucine rich proteoglycan Category: mRNA Synonyms: E2IG4|LRRC54|TSK Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 76782251 End Site(bp): 76798154 Gene Summary: NA External Links: Ensembl ID: ENSG00000182704 HGNC ID: HGNC:28850 Entrez Gene: 25987

Expression Profile of TSKU Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-143-3p YES NO YES hsa-miR-145-5p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-328-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES NO YES hsa-miR-370-3p YES YES YES hsa-miR-455-5p YES YES NO hsa-miR-491-5p YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-650 YES NO NO hsa-miR-665 YES NO YES hsa-miR-7-5p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-96-5p YES NO YES Display: