Entry Detail



General Information

Database ID:SKCM07021
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:LIG3
Full Name:DNA ligase 3
Category:mRNA
Synonyms:LIG2|LIG3alpha
Chromosome:chr17
Strand:+
Coordinate:
Start Site(bp):34980494End Site(bp):35009743
Gene Summary:This gene is a member of the DNA ligase family. Each member of this family encodes a protein that catalyzes the joining of DNA ends but they each have a distinct role in DNA metabolism. The protein encoded by this gene is involved in excision repair and is located in both the mitochondria and nucleus, with translation initiation from the upstream start codon allowing for transport to the mitochondria and translation initiation from a downstream start codon allowing for transport to the nucleus. Additionally, alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000005156
HGNC ID:HGNC:6600
Entrez Gene:3980



Expression Profile of LIG3 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-23a-3p
YES
YES
NO
hsa-miR-23b-3p
YES
YES
NO
hsa-miR-300
YES
YES
YES
hsa-miR-340-5p
YES
YES
NO
hsa-miR-381-3p
YES
YES
YES
hsa-miR-491-5p
YES
YES
NO
Display: