ctcRbase

Entry Detail

---



General Information

Database ID: SKCM07100 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SCARB1 Full Name: scavenger receptor class B member 1 Category: mRNA Synonyms: CD36L1|CLA-1|CLA1|HDLQTL6|SR-BI|SRB1 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 124776856 End Site(bp): 124882668 Gene Summary: The protein encoded by this gene is a plasma membrane receptor for high density lipoprotein cholesterol (HDL). The encoded protein mediates cholesterol transfer to and from HDL. In addition, this protein is a receptor for hepatitis C virus glycoprotein E2. Two transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Mar 2011] External Links: Ensembl ID: ENSG00000073060 HGNC ID: HGNC:1664 Entrez Gene: 949

Expression Profile of SCARB1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-136-5p YES YES NO hsa-miR-145-5p YES NO YES hsa-miR-149-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-185-5p YES YES YES hsa-miR-195-5p YES YES NO hsa-miR-214-3p YES NO NO hsa-miR-24-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-96-5p YES YES YES Display: