Entry Detail



General Information

Database ID:SKCM07117
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:WHRN
Full Name:whirlin
Category:mRNA
Synonyms:CIP98|DFNB31|PDZD7B|USH2D|WI
Chromosome:chr9
Strand:-
Coordinate:
Start Site(bp):114402080End Site(bp):114505450
Gene Summary:This gene is thought to function in the organization and stabilization of sterocilia elongation and actin cystoskeletal assembly, based on studies of the related mouse gene. Mutations in this gene have been associated with autosomal recessive non-syndromic deafness and Usher Syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2016]
External Links:
Ensembl ID:ENSG00000095397
HGNC ID:HGNC:16361
Entrez Gene:25861



Expression Profile of WHRN Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-224-5p
YES
YES
NO
hsa-miR-326
YES
YES
YES
hsa-miR-330-5p
YES
YES
YES
hsa-miR-410-3p
YES
YES
YES
hsa-miR-425-5p
YES
YES
NO
Display: