ctcRbase

Entry Detail

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General Information

Database ID: SKCM07202 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CTNND1 Full Name: catenin delta 1 Category: mRNA Synonyms: BCDS2|CAS|CTNND|P120CAS|P120CTN|p120|p120(CAS)|p120(CTN) Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 57753243 End Site(bp): 57819546 Gene Summary: This gene encodes a member of the Armadillo protein family, which function in adhesion between cells and signal transduction. Multiple translation initiation codons and alternative splicing result in many different isoforms being translated. Not all of the full-length natures of the described transcript variants have been determined. Read-through transcription also exists between this gene and the neighboring upstream thioredoxin-related transmembrane protein 2 (TMX2) gene. [provided by RefSeq, Dec 2010] External Links: Ensembl ID: ENSG00000198561 HGNC ID: HGNC:2515 Entrez Gene: 1500

Expression Profile of CTNND1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO NO hsa-miR-107 YES NO NO hsa-miR-124-3p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-142-3p YES YES YES hsa-miR-143-3p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-326 YES YES NO hsa-miR-329-3p YES YES YES hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-361-5p YES YES YES hsa-miR-362-3p YES YES YES hsa-miR-369-3p YES NO NO hsa-miR-378a-3p YES YES NO hsa-miR-410-3p YES YES YES hsa-miR-424-5p YES YES NO hsa-miR-425-5p YES YES YES hsa-miR-448 YES YES NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-455-5p YES YES YES hsa-miR-491-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-96-5p YES YES YES Display: