ctcRbase

Entry Detail

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General Information

Database ID: SKCM07449 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: USP46 Full Name: ubiquitin specific peptidase 46 Category: mRNA Synonyms: - Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 52590972 End Site(bp): 52659335 Gene Summary: Modification of cellular proteins by ubiquitin is an essential regulatory mechanism controlled by the coordinated action of multiple ubiquitin-conjugating and deubiquitinating enzymes. USP46 belongs to a large family of cysteine proteases that function as deubiquitinating enzymes (Quesada et al., 2004 [PubMed 14715245]).[supplied by OMIM, Jun 2009] External Links: Ensembl ID: ENSG00000109189 HGNC ID: HGNC:20075 Entrez Gene: 64854

Expression Profile of USP46 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-122-5p YES NO YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-128-3p YES NO YES hsa-miR-129-5p NO YES YES hsa-miR-137 NO YES YES hsa-miR-142-5p YES NO YES hsa-miR-143-3p YES NO YES hsa-miR-145-5p YES YES YES hsa-miR-17-5p YES YES YES hsa-miR-200b-3p NO YES YES hsa-miR-200c-3p NO YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-22-3p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-320a YES NO YES hsa-miR-320b YES NO YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-331-3p YES NO YES hsa-miR-33a-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-340-5p YES NO YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-379-5p YES NO YES hsa-miR-410-3p YES YES NO hsa-miR-429 NO YES YES hsa-miR-451a YES YES NO hsa-miR-483-3p YES NO YES hsa-miR-495-3p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-520f-3p YES NO YES hsa-miR-874-3p YES NO YES hsa-miR-93-5p YES YES YES Display: