ctcRbase

Entry Detail

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General Information

Database ID: SKCM07648 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GGA2 Full Name: golgi associated, gamma adaptin ear containing, ARF binding protein 2 Category: mRNA Synonyms: VEAR Chromosome: chr16 Strand: - Coordinate: Start Site(bp): 23463542 End Site(bp): 23521995 Gene Summary: This gene encodes a member of the Golgi-localized, gamma adaptin ear-containing, ARF-binding (GGA) family. This family includes ubiquitous coat proteins that regulate the trafficking of proteins between the trans-Golgi network and the lysosome. These proteins share an amino-terminal VHS domain which mediates sorting of the mannose 6-phosphate receptors at the trans-Golgi network. They also contain a carboxy-terminal region with homology to the ear domain of gamma-adaptins. This family member may play a significant role in cargo molecules regulation and clathrin-coated vesicle assembly. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000103365 HGNC ID: HGNC:16064 Entrez Gene: 23062

Expression Profile of GGA2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-1271-5p YES NO YES hsa-miR-128-3p YES NO YES hsa-miR-1297 YES YES NO hsa-miR-130a-3p YES NO YES hsa-miR-130b-3p YES NO YES hsa-miR-143-3p YES YES NO hsa-miR-146a-5p YES NO YES hsa-miR-146b-5p YES NO YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-204-5p YES NO YES hsa-miR-205-5p YES YES NO hsa-miR-211-5p YES NO YES hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-301a-3p YES NO YES hsa-miR-301b-3p YES NO YES hsa-miR-326 YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-330-5p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-381-3p YES YES NO hsa-miR-454-3p YES NO YES hsa-miR-488-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-7-5p YES NO YES hsa-miR-96-5p YES NO YES Display: