Entry Detail



General Information

Database ID:SKCM07733
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:SLC11A1
Full Name:solute carrier family 11 member 1
Category:mRNA
Synonyms:LSH|NRAMP|NRAMP1
Chromosome:chr2
Strand:+
Coordinate:
Start Site(bp):218382029End Site(bp):218396894
Gene Summary:This gene is a member of the solute carrier family 11 (proton-coupled divalent metal ion transporters) family and encodes a multi-pass membrane protein. The protein functions as a divalent transition metal (iron and manganese) transporter involved in iron metabolism and host resistance to certain pathogens. Mutations in this gene have been associated with susceptibility to infectious diseases such as tuberculosis and leprosy, and inflammatory diseases such as rheumatoid arthritis and Crohn disease. Alternatively spliced variants that encode different protein isoforms have been described but the full-length nature of only one has been determined. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000018280
HGNC ID:HGNC:10907
Entrez Gene:6556



Expression Profile of SLC11A1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-106a-5p
YES
YES
YES
hsa-miR-106b-5p
YES
YES
YES
hsa-miR-17-5p
YES
YES
YES
hsa-miR-20a-5p
YES
YES
YES
hsa-miR-20b-5p
YES
YES
YES
hsa-miR-340-5p
YES
YES
NO
hsa-miR-519d-3p
YES
YES
YES
hsa-miR-93-5p
YES
YES
YES
Display: