ctcRbase

Entry Detail

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General Information

Database ID: SKCM07814 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SAMHD1 Full Name: SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 Category: mRNA Synonyms: CHBL2|DCIP|HDDC1|MOP-5|SBBI88|hSAMHD1 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 36890229 End Site(bp): 36951843 Gene Summary: This gene may play a role in regulation of the innate immune response. The encoded protein is upregulated in response to viral infection and may be involved in mediation of tumor necrosis factor-alpha proinflammatory responses. Mutations in this gene have been associated with Aicardi-Goutieres syndrome. [provided by RefSeq, Mar 2010] External Links: Ensembl ID: ENSG00000101347 HGNC ID: HGNC:15925 Entrez Gene: 25939

Expression Profile of SAMHD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-155-5p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-495-3p YES YES NO Display: