ctcRbase

Entry Detail

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General Information

Database ID: SKCM07818 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: LRCH1 Full Name: leucine rich repeats and calponin homology domain containing 1 Category: mRNA Synonyms: CHDC1|NP81 Chromosome: chr13 Strand: + Coordinate: Start Site(bp): 46553168 End Site(bp): 46753040 Gene Summary: This gene encodes a protein with a leucine-rich repeat and a calponin homology domain. Polymorphism in this gene may be associated with susceptibililty to knee osteoarthritis. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2010] External Links: Ensembl ID: ENSG00000136141 HGNC ID: HGNC:20309 Entrez Gene: 23143

Expression Profile of LRCH1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p NO YES YES hsa-miR-106a-5p NO YES YES hsa-miR-106b-5p NO YES YES hsa-miR-1297 NO YES YES hsa-miR-130a-3p NO YES YES hsa-miR-130b-3p NO YES YES hsa-miR-1-3p NO YES YES hsa-miR-148a-3p NO YES YES hsa-miR-148b-3p NO YES YES hsa-miR-152-3p NO YES YES hsa-miR-153-3p NO YES YES hsa-miR-17-5p NO YES YES hsa-miR-19a-3p NO YES YES hsa-miR-19b-3p NO YES YES hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-206 NO YES YES hsa-miR-20a-5p NO YES YES hsa-miR-20b-5p NO YES YES hsa-miR-218-5p NO YES YES hsa-miR-22-3p NO YES YES hsa-miR-23a-3p NO YES YES hsa-miR-23b-3p NO YES YES hsa-miR-25-3p NO YES YES hsa-miR-26a-5p NO YES YES hsa-miR-26b-5p NO YES YES hsa-miR-301a-3p NO YES YES hsa-miR-301b-3p NO YES YES hsa-miR-32-5p NO YES YES hsa-miR-339-5p YES YES NO hsa-miR-363-3p NO YES YES hsa-miR-367-3p NO YES YES hsa-miR-429 YES YES NO hsa-miR-454-3p NO YES YES hsa-miR-519d-3p NO YES YES hsa-miR-613 NO YES YES hsa-miR-92a-3p NO YES YES hsa-miR-92b-3p NO YES YES hsa-miR-93-5p NO YES YES Display: