ctcRbase

Entry Detail

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General Information

Database ID: SKCM07898 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GRHL2 Full Name: grainyhead like transcription factor 2 Category: mRNA Synonyms: BOM|DFNA28|ECTDS|PPCD4|TFCP2L3 Chromosome: chr8 Strand: + Coordinate: Start Site(bp): 101492432 End Site(bp): 101669726 Gene Summary: The protein encoded by this gene is a transcription factor that can act as a homodimer or as a heterodimer with either GRHL1 or GRHL3. Defects in this gene are a cause of non-syndromic sensorineural deafness autosomal dominant type 28 (DFNA28).[provided by RefSeq, Mar 2009] External Links: Ensembl ID: ENSG00000083307 HGNC ID: HGNC:2799 Entrez Gene: 79977

Expression Profile of GRHL2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-122-5p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-134-5p YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-143-3p YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-17-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-185-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-340-5p YES NO YES hsa-miR-346 YES YES NO hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-375 YES YES NO hsa-miR-448 YES YES NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-485-5p YES YES NO hsa-miR-486-5p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-520f-3p YES NO YES hsa-miR-590-5p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-96-5p YES YES YES Display: