ctcRbase

Entry Detail

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General Information

Database ID: SKCM07904 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CDK13 Full Name: cyclin dependent kinase 13 Category: mRNA Synonyms: CDC2L|CDC2L5|CHDFIDD|CHED|hCDK13 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 39950037 End Site(bp): 40097134 Gene Summary: The protein encoded by this gene is a member of the cyclin-dependent serine/threonine protein kinase family. Members of this family are well known for their essential roles as master switches in cell cycle control. The exact function of this protein has not yet been determined, but it may play a role in mRNA processing and may be involved in regulation of hematopoiesis. Alternatively spliced transcript variants have been described.[provided by RefSeq, Dec 2009] External Links: Ensembl ID: ENSG00000065883 HGNC ID: HGNC:1733 Entrez Gene: 8621

Expression Profile of CDK13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES YES hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-215-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-25-3p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-324-5p YES YES NO hsa-miR-32-5p YES YES NO hsa-miR-335-5p YES YES YES hsa-miR-340-5p YES NO YES hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-455-5p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-599 YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-758-3p YES YES YES hsa-miR-874-3p YES YES NO hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO Display: