ctcRbase

Entry Detail

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General Information

Database ID: SKCM08005 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: OTUD3 Full Name: OTU deubiquitinase 3 Category: mRNA Synonyms: DUBA4 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 19882513 End Site(bp): 19912945 Gene Summary: NA External Links: Ensembl ID: ENSG00000169914 HGNC ID: HGNC:29038 Entrez Gene: 23252

Expression Profile of OTUD3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-101-3p YES YES YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-136-5p YES YES YES hsa-miR-138-5p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-144-3p YES NO YES hsa-miR-15a-5p YES NO NO hsa-miR-15b-5p YES NO NO hsa-miR-17-5p YES YES YES hsa-miR-200a-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-219a-5p YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-300 YES NO YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-31-5p YES YES NO hsa-miR-320a YES NO YES hsa-miR-320b YES NO YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-34a-5p YES NO YES hsa-miR-34c-5p YES NO YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-376a-3p YES YES YES hsa-miR-376b-3p YES YES YES hsa-miR-381-3p YES NO YES hsa-miR-424-5p YES NO NO hsa-miR-449a YES NO YES hsa-miR-449b-5p YES NO YES hsa-miR-454-3p YES YES YES hsa-miR-494-3p YES YES YES hsa-miR-497-5p YES NO NO hsa-miR-503-5p YES NO NO hsa-miR-506-3p YES NO YES hsa-miR-519d-3p YES NO YES hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES hsa-miR-93-5p YES NO YES hsa-miR-9-5p YES YES YES hsa-miR-98-5p YES NO YES Display: